CDS

Accession Number TCMCG006C65876
gbkey CDS
Protein Id XP_013711936.1
Location join(14389773..14389896,14390033..14390148,14390226..14390324,14390401..14390457,14390534..14390689,14390759..14390843,14390917..14391172,14391673..14391795,14391892..14392103,14392166..14393259,14393344..14393534,14393611..14393740)
Gene LOC106415718
GeneID 106415718
Organism Brassica napus

Protein

Length 880aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013856482.2
Definition auxin response factor 5-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K14486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000578        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009798        [VIEW IN EMBL-EBI]
GO:0009880        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009942        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010051        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010305        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048507        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGGCTTCATTGGCTTGTGTTGAGGAGAAGATGAAAACAAATGGTTTGGTTAACGGAGGAACAACAACAACATCTCAATCTTCTCTGCTTGAAGAGATGAAGCTGTTGAAGGATCAGTCAGGAACGAGAAAGCCGGTAATAAACTCGGAGCTATGGCACGCTTGTGCAGGCCCTCTGGTTTGTCTTCCTCAAGTTGGGAGCTTAGTGTATTACTTCTCACAAGGTCACAGTGAACAGGTTGCTGTTTCAACCAGAAGGTCTGCAACAACCCAAGTTCCTAACTACCCAAATCTTCCATCTCAGTTGATGTGCCAAGTCCATAATGTTACCCTTCACGCAGACAAAGACAGTGACGAAATTTATGCTCAGATGAGTCTACAACCTGTTCACTCTGAGAGAGATGTGTTCCCAGTACCAGACTTTGGACTATTGAGCAGAAGCAAGCACCCAGCTGAGTTTTTCTGCAAAACGCTTACTGCGAGTGATACAAGTACACATGGAGGTTTCTCTGTGCCACGTAGAGCTGCAGAGAAGCTATTCCCACCGCTGGACTACACAGCACAGCCTCCAACGCAGGAGCTTGTAGTTAGAGATCTTCATGAGAATACCTGGACATTTCGCCATATATATCGAGGGCAGCCAAAGAGACATCTCCTGACAACAGGATGGAGTTTGTTTGTTGGCTCAAAGAGACTGAGAGCTGGAGATTCTGTTTTGTTCATCAGGGATGAGAAGTCGCAGCTGATGGTTGGTGTGAGGCGAGCTAATCGCCAACAAACAGCGCTTCCTTCATCTGTTCTCTCAGCAGACAGTATGCACATCGGTGTCCTAGCTGCTGCTGCTCACGCAACTGCAAATCGCACTCCTTTCTTGATTTTCTATAATCCAAGAGCGTGTCCAGCAGAGTTTGTGATCCCTCTAGCTAAGTACCGGAAGGCTATATGTGGATCTCAGCTCTCAGTTGGTATGAGGTTTGGAATGATGTTTGAAACTGAGGATTCAGGGAAACGTAGATACATGGGAACCATAGTTGGAATCAGCGATATGGATCCGTTGAGATGGGCTGGTTCTAAGTGGCGTAACCTACAAGTTGAATGGGATGAGCCTGGATGTAACGACAAACCTAATAGGGTCAGTCCATGGGATATTGAAACACCTGAGAGTCTCTTCATTTTTCCTTCTCTCACCTCAGGACTCAAACGTCAGCTCCATCCATCTTACTTTGCTGGTGAAACCGAATGGGGTAGCTTGATCAAACGTCCTCTAATCCGTGATTCCACAAATGGGATTCTGCCTTACGCATCATTCCCAAACATGGCTTCAGAGCAGCTTATGAGAATGATGATGAGACCTCACAACAACAACAACAACAACAACCAGAATGCATCCTCTTTCATGTCTGAGATGCAGCAGACTGTTTTAATGGGGCATGGCGGTTTACTAGGAGATATGAATATGCAGCAGCAACCAATGGTATCTGAGATGGTGCGACCAGAAAGCAAGCTGACTGTGAACCCATCTGCTTCCAATACAAGTGGCCAAGAACAGAATCTGTCACAGAGTATGAGTGCTCCTCCAAAACCTGAAAAGCCAACTCTCTCTGGCTGTAGCTCTGTGAGAGTCAACCATGGAAATGAGCAGAAGTCAGTGGAACAGGCTAGCCAGGTGAGAGCAGTCGCTGTGTGTAATGAGTCAGCTTTGTCTCCATTACAAGCTGATCCATCTCCTGACACAAGTCAACAGATATATCCACCACAGTCTAATGGATTCTCTTTCCTGGAATCAGAAGAGCTGACATCACAAGTCTCATCCTTCCAGTCACTAGCCGGATCATACAAGCAACCACCAATGCTAACCTCCCAGGATTCTTCAGCTGTTGTGTTGCCTGATTCAACAAACTCACCGCTGTTTCACGATGTGTGGGACAATCAGCTAAAGTTTGACCAGTTCAGTCCCTTGATGAATCAAGACCTTTATGGTTGTCAGGATAGCACAACCAGCAACATTCTAGATCCTCCTCCACTCTCAAACCCAGTTCTTGATGACTTCTGTGCCATCAAAGAAGCCGATTTTCAGAATCATCACCCTTCTGATTGTTTGGTCGGGAACAGCTACACTAGCTTCGCTCAAGATGTATCACAGATCACATCTGCTAGCTTTGCAGACTCAAAGGCCATTTCTCGCCAAGATAACTCTGGAGGAACTACTGGTACGTCTTCAAGCAATGTTGATTTTGATGATAATAGTCTGCTGCAGCAGAATAGTAAAGGCTCATGGCAGAAACTTGCTGCAACCCCTCGTGTCCGAACCTACACTAAGGTTCAAAAAACCGGGTCAGTTGGTAGGTCAATTGATGTCACAAGCTTCAGAGACTACAAGGAGTTGAAAACTGCAATAGAGTGTATGTTTGGACTTGAAGGATTACTCACTCGTCCGCAAAGCTCAGGATGGAAGCTTGTGTATGTTGATTATGAGAGTGATGTTCTGCTTGTAGGAGATGATCCATGGGAAGAGTTTGTGGGATGTGTAAGGTGCATAAAGATATTGTCGCCAACAGAGGTTGAGCATATGAGTGAAGAAGGAATGAAGCTTTTGAACAGCGCTTGCATAAATGATCTCAAGTCTTCTGTTTCTAAATGA
Protein:  
MMASLACVEEKMKTNGLVNGGTTTTSQSSLLEEMKLLKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLSRSKHPAEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDMDPLRWAGSKWRNLQVEWDEPGCNDKPNRVSPWDIETPESLFIFPSLTSGLKRQLHPSYFAGETEWGSLIKRPLIRDSTNGILPYASFPNMASEQLMRMMMRPHNNNNNNNQNASSFMSEMQQTVLMGHGGLLGDMNMQQQPMVSEMVRPESKLTVNPSASNTSGQEQNLSQSMSAPPKPEKPTLSGCSSVRVNHGNEQKSVEQASQVRAVAVCNESALSPLQADPSPDTSQQIYPPQSNGFSFLESEELTSQVSSFQSLAGSYKQPPMLTSQDSSAVVLPDSTNSPLFHDVWDNQLKFDQFSPLMNQDLYGCQDSTTSNILDPPPLSNPVLDDFCAIKEADFQNHHPSDCLVGNSYTSFAQDVSQITSASFADSKAISRQDNSGGTTGTSSSNVDFDDNSLLQQNSKGSWQKLAATPRVRTYTKVQKTGSVGRSIDVTSFRDYKELKTAIECMFGLEGLLTRPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIKILSPTEVEHMSEEGMKLLNSACINDLKSSVSK